| featureTableNormalize {Mosaic} | R Documentation |
Function to normalize data in a matrix.
featureTableNormalize(mx, raiseZeros = NULL, log = NULL, normalize = NULL, threshold = NULL, thresholdMethod = NULL)
mx |
a matrix of numeric (intensity) values |
raiseZeros |
if not NULL, values of 0 will be raised to a level defined by a character string. "min" will raise all zeros to the lowest non-zero value in mx. |
log |
if not NULL, log10 will be applied to values in mx |
normalize |
if not NULL, column values will be normalized by column averages |
threshold |
numeric(1). |
thresholdMethod |
if not NULL, removes all rows in mx in which no value is above threshold |