multittest {Mosaic}R Documentation

multittest

Description

Calculate per-row t-test between grouped columns of a data.frame. Note that for column groups with less than 2 members, a pseudo-ttest will be calculated via Mosaic::ttestx to avoid throwing errors.

Usage

multittest(df = as.data.frame(mx), groups, ttest = T,
  adjmethod = "bonferroni")

Arguments

df

a data.frame with numeric (intensity) values

groups

named list of intensity columns listed by group (as supplied by $anagroupnames or $anagroupnames_norm of MosaicFT objects)

ttest

if TRUE, ttest will be calculated

adjmethod

method to adjust p values (passed on to stats::p.adjust)


[Package Mosaic version 0.7.2 Index]